General Imaging Workbench

Tools on the General Imaging Workbench

SoftwareVersionDescription
3D Slicer4.6.0Slicer4, 3D cross-platform medical image processing and visualization
Amira6.3.0Amira is a powerful, multifaceted 3D software platform for visualizing, manipulating, and understanding life sciences data from computed tomography, microscopy, MRI, and many other imaging modalities
Avizo9.1, 9.3Avizo is an advanced 3D analysis software application for exploring and understanding materials structures and properties, in a wide range of materials science research areas and for many types of materials
Convert3D1.0ITK based medical image processing tool
Drishti2.6.3Drishti is a volume exploration and presentation tool
Fiji20170528Fiji is an image processing package—a "batteries-included" distribution of ImageJ, bundling a lot of plugins which facilitate scientific image analysis
GIMP2.8GIMP is the GNU image manipulation program
ilastik1.2.0ilastik is a simple, user-friendly tool for interactive image classification, segmentation and analysis
IMOD4.8.54IMOD is a set of image processing, modeling and display programs used for tomographic reconstruction and for 3D reconstruction of EM serial sections and optical sections
ITKSNAP3.3ITKSNAP is Used to segment structures in 3D medical images
MRIcroGL1.0.20170207MRIcroGL allows you to view 2D slices and renderings of your brain imaging data